Publications

Under Review and In preparation

• Pulkit Khandelwal, Shokufeh Sadaghiani, Sadhana Ravikumar, Sydney Lim, Sanaz Arezoumandan, Claire Peterson, Eunice Chung, Madigan Bedard, Noah Capp, Ranjit Ittyerah, Elyse Migdal, Grace Choi, Emily Kopp, Bridget Loja, Eusha Hasan, Jiacheng Li, Karthik Prabhakaran, Gabor Mizsei, Marianna Gabrielyan, Theresa Schuck, John Robinson, Daniel Ohm, Edward Lee, John Q. Trojanowski, Corey McMillan, Murray Grossman, David Irwin, M. Dylan Tisdall, Sandhitsu R. Das, Laura E.M. Wisse, David A. Wolk, Paul A. Yushkevich. Gray Matter Segmentation in Ultra High Resolution 7 Tesla ex vivo T2w MRI of Human Brain Hemispheres (Under review) arXiv link
• Long Xie, Laura E.M. Wisse, Jiancong Wang, Sadhana Ravikumar, Pulkit Khandelwal, Trevor Glenn, Anica Luther, Sydney Lim, David A. Wolk, and Paul A. Yushkevich. Deep Label Fusion: A Generalizable Hybrid Multi-Atlas and Deep Convolutional Neural Network for Medical Image Segmentation [Under Review at Medical Image Analysis Journal]

Peer-reviewed conferences and journals

• Ahmed H. Aly, Pulkit Khandelwal, Abdullah H. Aly, Takayuki Kawashima, Kazuki Mori, Yoshiaki Saito, Judy Hung, Joseph H. Gorman III, Alison M. Pouch, Robert C. Gorman, and Paul A. Yushkevich. Fully Automated 3D Segmentation and Diffeomorphic Medial Modeling of the Left Ventricle Mitral Valve Complex in Ischemic Mitral Regurgitation. Medical Image Analysis Journal 2022 Link
• Pulkit Khandelwal, D. Louis Collins, Kaleem Siddiqi. Spine and Individual Vertebrae Segmentation in Computed Tomography Images using Geometric Flows and Shape Priors. Frontiers in Computer Science 2021 Link
• Pulkit Khandelwal and Paul A. Yushkevich. Domain Generalizer: A Few-shot Meta Learning Framework for Domain Generalization in Medical Imaging. Domain Adpatation and Representation Transfer Workshop, International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI) 2020 Link
• Mark E., Christopher, Mingfang, Stephen R., Pulkit Khandelwal. Benchmarking Human Performance in Semiautomated Image Segmentation. Interacting with Computers, Oxford University Press 2020 Link
• Zimmerman, Carrie E., Pulkit Khandelwal, Long Xie, Hyunyeol Lee, Hee Kwon Song, Paul A. Yushkevich, Arastoo Vossough, Scott P. Bartlett, and Felix W. Wehrli. Automatic Segmentation of Bone Selective MR Images for Visualization and Craniometry of the Cranial Vault. Academic Radiology (2021). Link Joint first authors

Peer-reviewed conference abstracts and poster presentations

• Pulkit Khandelwal, Michael Tran Duong, Eunice Chung, Shokufeh Sadaghiani, MD1, Sydney A Lim, Sadhana Ravikumar, Sanaz Arezoumandan, Claire Peterson, Madigan L Bedard, Noah Capp, Ranjit Ittyerah, Elyse Migdal, Grace Choi, Emily Kopp, Bridget Loja Patino, Eusha Hasan, Jiacheng Li, Karthik Prabhakaran, Gabor Mizsei, Marianna Gabrielyan, Theresa Schuck, John L. Robinson, Daniel T Ohm, Ilya M. Nasrallah, Eddie B Lee, John Q Trojanowski, Corey T McMillan, Murray Grossman, David J. Irwin, Dylan M Tisdall, Sandhitsu R. Das, Laura EM Wisse, David A. Wolk, and Paul A. Yushkevich , Deep Learning for Ultra High Resolution T2-weighted 7 Tesla Ex vivo Magnetic Resonance Imaging Reveals Differential Subcortical Atrophy across Neurodegenerative Diseases, Alzheimer’s Association International Conference (AAIC) 2022
• Pulkit Khandelwal, Shokufeh Sadaghiani, Eunice Chung, Sydney A Lim, Michael Tran Duong, Sadhana Ravikumar, Sanaz Arezoumandan, Claire Peterson, Madigan L Bedard, Noah Capp, Ranjit Ittyerah, Elyse Migdal, Grace Choi, Emily Kopp, Bridget Loja Patino, Eusha Hasan, Jiacheng Li, Karthik Prabhakaran, Gabor Mizsei, Marianna Gabrielyan, Theresa Schuck, John Robinson, Daniel T Ohm, Eddie B Lee, John Q Trojanowski, Corey T McMillan, Murray Grossman, David J. Irwin, Dylan M Tisdall, Sandhitsu R. Das, Laura EM Wisse, David A. Wolk and Paul A. Yushkevich , Deep learning pipeline for cortical gray matter segmentation and thickness analysis in Ultra High Resolution T2w 7 Tesla Ex vivo MRI across neurodegenerative diseases reveals associations with underlying neuropathology, Alzheimer’s Association International Conference (AAIC) 2022
• Shokufeh Sadaghiani, Sudipto Dolui, Pulkit Khandelwal, Mohammad Taghvaei, Banafsheh Shakibajahromi, Sandhitsu R. Das, Paul A. Yushkevich, David A. Wolk and John A. Detre, Associations between cortical microinfarcts, hippocampal atrophy, and cerebral small vessel disease, Alzheimer’s Association International Conference (AAIC) 2022
• Mohammad Taghvaei, Philip Cook, Pulkit Khandelwal, Banafsheh Shakibajahromi, Shokufeh Sadaghiani, Sandhitsu R. Das, Christopher Brown, William Tackett, Sudipto Dolui, Russell T. Shinohara, David A. Wolk and John A. Detre, Mechanisms of Cognitive Decline due to White Matter Lesions in Cognitively Intact Older Adults, Alzheimer’s Association International Conference (AAIC) 2022
• Pulkit Khandelwal, Long Xie, Danielle S. Bassett, Robin de Flores, David A. Wolk, Paul A. Yushkevich, and Sandhitsu R. Das. Longitudinal Network Connectivity Measurements in Medial Temporal Lobe Subregions Discriminate Preclinical Alzheimer’s Disease Patients from Amyloid-𝛽 Negative Controls. Alzheimer’s Association International Conference (AAIC) 2020 Talk link
• Pulkit Khandelwal, C. E. Zimmerman, L. Xie, H. Lee, H. K. Song, S. P. Bartlett, P. A. Yushkevich, F. W. Wehrli. Automated Segmentation of the Human Cranial Vault with Bone-Selective MRI as an alternative to radiative CT for Craniofacial Imaging. European Society for Magnetic Resonance in Medicine and Biology (ESMRMB) 2020 (Lightning Talk)
• Pulkit Khandelwal, Carrie E. Zimmerman, Long Xie, Hyunyeol Lee, Cheng-Chieh Cheng, Scott P. Bartlett, Paul Yushkevich, Felix W. Wehrli. Automated Segmentation of Human Skull to plan Craniofacial Surgery using dual-Radiofrequency dual-Echo, 3D Ultrashort Echo Time MRI sequence. International Society of Magnetic Resonance in Medicine (ISMRM), Paris, France 2020
• Carrie E Zimmerman, Pulkit Khandelwal, Rosaline S Zhang, Long Xie, Hyunyeol Lee, Jesse A. Taylor, Jordan W Swanson, Paul Yushkevich, Felix W Wehrli, Scott Paul P Bartlett. Bone-Selective MRI As a Nonradiative Alternative to CT for Cranial Vault Imaging: Concordance and Implementation of an Automated Segmentation Pipeline for Timely Image Processing. Plastic Surgery the Meeting 2020
• Dillan F. Villavisanis, Pulkit Khandelwal, Zachary D. Zapatero, Connor S. Wagner, Daniel Y. Cho, Jessica D. Blum, Liana Cheung, Jordan W. Swanson, Jesse A. Taylor, Paul A. Yushkevich, Scott P. Bartlett. Development Of A Craniofacial Soft Tissue Anthropomorphic Database: Application Of Diffeomorphic Algorithms To MRI. American Association of Plastic Surgeons 2022
• Dillan F. Villavisanis, Pulkit Khandelwal, Zachary D. Zapatero, Connor S. Wagner, Daniel Y. Cho, Jessica D. Blum, Liana Cheung, Jordan W. Swanson, Jesse A. Taylor, Paul A. Yushkevich, Scott P. Bartlett. Development of a Craniofacial Soft Tissue Anthropomorphic Database: Application of Diffeomorphic Algorithms to MRI. American Cleft Palate-Craniofacial Association 2022
• Dillan F Villavisanis, Pulkit Khandelwal, Zachary D Zapatero, Connor S Wagner, Daniel Y Cho, Liana Cheung, Jessica D Blum, Jordan W Swanson, Jesse A Taylor, Paul A Yushkevich, Scott P Bartlett. Developing a Craniofacial Soft Tissue Anthropomorphic Database: Applying Diffeomorphic Building Methods to MRI with Advanced Normalization Tools International Society of Magnetic Resonance in Medicine (ISMRM), London, UK 2022
• Pulkit Khandelwal, M. Barth, S. Bollmann. Performance evaluation for automated segmentation of Hippocampus Subfields: Preliminary Results using FreeSurfer and ASHS. European Society for Magnetic Resonance in Medicine and Biology (ESMRMB), Vienna, Austria, September 2016 (Lightning Talk)